---
title: scvi-tools
description: Deep probabilistic analysis of single-cell and spatial omics data
tags:
- cite-seq
- deep-generative-model
- human-cell-atlas
- probabilistic
- scrna-seq
- scverse
- single-cell
- single-cell-genomics
- source-code
license: BSD-3-Clause
source_url: https://github.com/scverse/scvi-tools
---

# scvi-tools

> **Mirrored metadata.** This card is reproduced on Atlas for discovery. The artifact itself is not hosted here — follow the source link for the files, and refer to the upstream licence for terms of use.

Deep probabilistic analysis of single-cell and spatial omics data

Upstream repository: `scverse/scvi-tools`.

**Source:** https://github.com/scverse/scvi-tools

**Licence:** BSD-3-Clause

_This model is part of the Atlas demo catalogue. See the repository history for provenance._