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Benchmarks / single-cell-batch-integration

Single-cell batch integration (scIB)

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single-cell/single-cell-batch-integration Task: embedding Visibility: PUBLIC
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Overview

Integration of single-cell profiles from four Tabula Sapiens liver donors (CELLxGENE), donor = batch: scIB cell-type ASW, batch ASW and graph connectivity of frozen foundation-model embeddings (zero-shot) and of integration models trained from scratch (scVI).

Leaderboard

Ranked results, with their source, uncertainty and floors, the protocol and a sample of the data are on the Leaderboard tab.